MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Jeotgalicoccus nanhaiensis
19428wE5_W307
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 28
bases: 2,247,970 bps
CDS: 2,232
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,295
Total number of protein coding genes annotated/found:
2,232
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5028|JADGLW010000009.1
SEQF5028_02294
Genome Viewer
NA
AA
1245/415
76855-75611
Arginine decarboxylase
SEQF5028|JADGLW010000009.1
SEQF5028_02293
Genome Viewer
NA
AA
630/210
75614-74985
Thymidylate kinase
SEQF5028|JADGLW010000009.1
SEQF5028_02292
Genome Viewer
NA
AA
330/110
74985-74656
Cyclic di-AMP receptor A
SEQF5028|JADGLW010000009.1
SEQF5028_02291
Genome Viewer
NA
AA
837/279
74585-73749
hypothetical protein
SEQF5028|JADGLW010000009.1
SEQF5028_02290
Genome Viewer
NA
AA
810/270
73739-72930
hypothetical protein
SEQF5028|JADGLW010000009.1
SEQF5028_02289
Genome Viewer
NA
AA
312/104
72930-72619
Initiation-control protein YabA
SEQF5028|JADGLW010000009.1
SEQF5028_02288
Genome Viewer
NA
AA
741/247
72580-71840
tRNA1(Val) (adenine(37)-N6)-methyltransferase
SEQF5028|JADGLW010000009.1
SEQF5028_02287
Genome Viewer
NA
AA
258/86
71856-71599
hypothetical protein
SEQF5028|JADGLW010000009.1
SEQF5028_02286
Genome Viewer
NA
AA
813/271
71596-70784
Ribosomal RNA small subunit methyltransferase I
SEQF5028|JADGLW010000009.1
SEQF5028_02285
Genome Viewer
NA
AA
279/93
70465-70743
Transition state regulatory protein AbrB
SEQF5028|JADGLW010000009.1
SEQF5028_02284
Genome Viewer
NA
AA
1971/657
70241-68271
Methionine--tRNA ligase
SEQF5028|JADGLW010000009.1
SEQF5028_02283
Genome Viewer
NA
AA
765/255
68254-67490
putative metal-dependent hydrolase YcfH
SEQF5028|JADGLW010000009.1
SEQF5028_02282
Genome Viewer
NA
AA
555/185
67374-66820
Ribonuclease M5
SEQF5028|JADGLW010000009.1
SEQF5028_02281
Genome Viewer
NA
AA
885/295
66820-65936
Ribosomal RNA small subunit methyltransferase A
SEQF5028|JADGLW010000009.1
SEQF5028_02280
Genome Viewer
NA
AA
267/89
65860-65594
Protein Veg
SEQF5028|JADGLW010000009.1
SEQF5028_02279
Genome Viewer
NA
AA
1092/364
65482-64391
hypothetical protein
SEQF5028|JADGLW010000009.1
SEQF5028_02278
Genome Viewer
NA
AA
564/188
64391-63828
hypothetical protein
SEQF5028|JADGLW010000009.1
SEQF5028_02277
Genome Viewer
NA
AA
564/188
63217-63780
Urocanate reductase
SEQF5028|JADGLW010000009.1
SEQF5028_02276
Genome Viewer
NA
AA
906/302
63041-62136
hypothetical protein
SEQF5028|JADGLW010000009.1
SEQF5028_02275
Genome Viewer
NA
AA
702/234
62123-61422
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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